Supplementary material for papers

2024

• INLAComp project

  • Manuscript A flexible Bayesian tool for CoDa mixed models: logistic-normal distribution with Dirichlet covariance

  • R-Code: INLAComp

  • Tutorials:

    1. Fitting LNDMs with fixed effects
    2. Fitting Spatial LNDMs. A simulation
    3. Fitting LNDMs with fixed and random effects. A real problem

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2023

• dirinla project

  • Manuscript: The integrated Nested Laplace Approximation for fitting Dirichlet regressions or arxiv link

  • R-Code: dirinla

  • Tutorials:

    1. Fitting Dirichlet regression with fixed effects
    2. Fitting Dirichlet regression with random effects
    3. Simulation results using fixed and i.i.d. random effects

2021

• Plant’s epidemiology

  • Manuscript: Modeling Inoculum Availability of Plurivorosphaerella nawae in Persimmon Leaf Litter with Bayesian Beta Regression

  • R-Code: betapathogen

  • Tutorials:

    1. Fitting a mixed model for inoculum availability

2019

• Arabidopsis thaliana

  • Manuscript: A hierarchical Bayesian Beta regression approach to study the effects of geographical genetic structure and spatial autocorrelation on species distribution range shifts

  • R-Code: Arabidopsis